MHC-I peptide Screening using Fuzzy Inference System - Leishmania donovani proteome
MHC-FIS-LdDB is a database of peptides (L. donovani proteome) categorized by the fuzzy inference system. The categorization is based on the six different epitope features including normalized score based on binding prediction of 27 major alleles by four different machine learning tools, normalized score from prediction of T-cell propensity, normalized score from prediction of pro-inflammatory response, normalized score form proteasome cleavage prediction, normalized score of TAP transport efficiency, and normalized score based on BLAST continuous similarity with human proteins. A total of 60 fuzzy rules were implemented to determine the probable epitope for the peptide: "Low", "Moderate", "High", or "Very High". The database has easy search capabilities and gives complete access to data. Click "Know more" for the detailed method.
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| More Info. | ID | Start | End | Peptide | Population Coverage | Category Score | Fuzzy Output |
|---|---|---|---|---|---|---|---|
| More Info. | ID | Start | End | Peptide | Population Coverage | Category Score | Fuzzy Output |
Proteins not containig Very high / High category peptides